Protein ZmMYB47 | |
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ZmMYB47 is a protein in the MYB family.
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Information | |
TF Name: | ZmMYB47 |
Species: | Maize |
TF Family: | MYB |
Gene Name(Synonym): | MYB47 |
Uniprot ID: | B6T169 |
Subgenome: | 1 |
ZmMYB47 is a protein in the MYB family.
Overview of domains present in v5 transcripts | ||
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PF00249 | PF13921 | |
Zm00001eb155190_T002 | ||
Zm00001eb155190_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d043687 | DAPseq | ![]() |
sequence | fimo | position |
Zm00001d043687 | DAPseq | ![]() |
sequence | fimo | position |
Zm00001d043687 | ChIPseq | ![]() |
sequence | fimo | position |
Zm00001d043687 | PChIPseq | ![]() |
sequence | fimo | position |
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00249 |
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PF13921 |
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PF00249 |
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PF13921 |
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Hover here to show all domains |
TCCGTCCAGCTCCCTTAGCCATGCA...
TCCGTCCAGCTCCCTTAGCCATGCATGAAGCCCTCGGCGGTCCAGCCACTCACATTTGAGGCAACCTAGAGCGTGTGCAGTAACATGCCTGCTCACACGCCTAGGCTCATAGCTAGCTAAGCTTAGGGTTCCAACTGCATGCACAGGTTTGGGCCGACTTTTCCTGCCCGTGCTTTTACCCTGCCTGCCCAGCCCTGGCCCTGGGTGCGTTTGCATTGCAGCCACTGCATGGATGCATTTGGCATGCCGCGGTACTGCTGCTCGCTCGCCCCTTCCGGTCCGGCCCTCGTCGTCTTCTTTATAACCACGCGCCACTGAAAGCTCGAGCGCTTCTGGCACTTGAATCCGTTTGCGTCGTCGTCGTTCCTGTGTGCAGTGCGCGGTGCGCCACTGCTAGTGAGAAGAGATATAGCTAGGCTTCAGTGCGACGACGACGACGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCCGGAGGGGCTTGTGGTCGCCGGAGGAGGACGAGAAGCTCGTCAAGTACATCACCGCGCACGGCCATGGTTGCTGGAGCTCAGTCCCAAGGCAAGCAGGGCTGCAGCGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTGAAGAGGGGAAGCTTCTCGCAGCAGGAGGAGGCCCTCATCGTCGAGCTCCACAGGGTGCTTGGGAACAGGTGGGCCCAGATCGCCAAGCATCTGCCTGGTAGAACGGACAACGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATCTCCCAGGCCGTGGGCAGCCTCCACCCAGACCTGTACTACAACATTCTGGATGGAGGAGCCGCCGGAGCACAGGACCTCGCGGCCGCCGGATGCGCGCCGCTGAACGGGGCGGACAGCGCGTCAGCAGCGGCGGCGCAAGCAGTGGGCGTGACGACGACGCAGCCTTCTCCTTCCATGGCGCACGTCGACCCCGCGGCGGCGTGGGCGGCGGACTTCGGCTCCCAGACGCTCTTCCTCCCCGGCGGCGCGGCCGCTCTCCAGTACGCCGCCGCCGTCGAGGGGGAGTTCGTCAAGCAGTGCCGCACGGCGGCGGACGCCTGCTACCCGCCGGAGCCGGAGGACGGCGGCGGCGGCGCGAGGCAGTGCAACAACCAGGCAGCTGCCGATGTCGTGACGGCGGCGGTGCAACCGGAAGGCGCCGGCCTCCCGGTGTTCCTTGAACCCAAGTGCGCCGGCAGTTTCATGCCCGAGCCTGCTCTGGCTCCGGTGATGGACTTCATGGAAGCCATCCTGGGGTCGACGGCGGCGGCGTCGGCTGCCAGCGCTTCGTCTCTCGACGACACCTGCTTCTCGGCGAACGCCGGCATGCAGTCCCACTGTTGGATTCCCTGAATTATTCACCCTATTTACTTCCATCGGTAGATGCATATATACATGCATGGATGACTCTTCATCAAGCGCGCGCGGAGTATCAGATATGATTAAGTATAGAGTTTATGAAATAATTAATATAGATATAGTAGGTTTCTCTCACTCTCATCGATCAGGGTAGTAACAACATGGGTTACATGTAAATATGTTTACGTACGTATATATAA
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
GCCCCTTCCGGTCCGGCCCTCGTCG...
GCCCCTTCCGGTCCGGCCCTCGTCGTCTTCTTTATAACCACGCGCCACTGAAAGCTCGAGCGCTTCTGGCACTTGAATCCGTTTGCGTCGTCGTCGTTCCTGTGTGCAGTGCGCGGTGCGCCACTGCTAGTGAGAAGAGATATAGCTAGGCTTCAGTGCGACGACGACGACGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCCGGAGGGGCTTGTGGTCGCCGGAGGAGGACGAGAAGCTCGTCAAGTACATCACCGCGCACGGCCATGGTTGCTGGAGCTCAGTCCCAAGGCAAGCAGGGCTGCAGCGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTGAAGAGGGGAAGCTTCTCGCAGCAGGAGGAGGCCCTCATCGTCGAGCTCCACAGGGTGCTTGGGAACAGGTGGGCCCAGATCGCCAAGCATCTGCCTGGTAGAACGGACAACGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATCTCCCAGGCCGTGGGCAGCCTCCACCCAGACCTGTACTACAACATTCTGGATGGAGGAGCCGCCGGAGCACAGGACCTCGCGGCCGCCGGATGCGCGCCGCTGAACGGGGCGGACAGCGCGTCAGCAGCGGCGGCGCAAGCAGTGGGCGTGACGACGACGCAGCCTTCTCCTTCCATGGCGCACGTCGACCCCGCGGCGGCGTGGGCGGCGGACTTCGGCTCCCAGACGCTCTTCCTCCCCGGCGGCGCGGCCGCTCTCCAGTACGCCGCCGCCGTCGAGGGGGAGTTCGTCAAGCAGTGCCGCACGGCGGCGGACGCCTGCTACCCGCCGGAGCCGGAGGACGGCGGCGGCGGCGCGAGGCAGTGCAACAACCAGGCAGCTGCCGATGTCGTGACGGCGGCGGTGCAACCGGAAGGCGCCGGCCTCCCGGTGTTCCTTGAACCCAAGTGCGCCGGCAGTTTCATGCCCGAGCCTGCTCTGGCTCCGGTGATGGACTTCATGGAAGCCATCCTGGGGTCGACGGCGGCGGCGTCGGCTGCCAGCGCTTCGTCTCTCGACGACACCTGCTTCTCGGCGAACGCCGGCATGCAGTCCCACTGTTGGATTCCCTGAATTATTCACCCTATTTACTTCCATCGGTAGATGCATATATACATGCATGGATGACTCTTCATCAAGCGCGCGCGGAGTATCAGATATGATTAAGTATAGAGTTTATGAAATAATTAATATAGATATAGTAGGTTTCTCTCACTCTCATCGATCAGGGTAGTAACAACATGGGTTACATGTAAATATGTTTACGTACGTATATATAA
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQADLYYNILDGGAAGAQDLAAAGCAPLNGADSASAAAA
QAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCNNQ
AAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
GCTTCTGGCACTTGAATCCGTTTGC...
GCTTCTGGCACTTGAATCCGTTTGCGTCGTCGTCGTTCCTGTGTGCAGTGCGCGGTGCGCCACTGCTAGTGAGAAGAGATATAGCTAGGCTTCAGTGCGACGACGACGACGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCCGGAGGGGCTTGTGGTCGCCGGAGGAGGACGAGAAGCTCGTCAAGTACATCACCGCGCACGGCCATGGTTGCTGGAGCTCAGTCCCAAGGCAAGCAGACCTGTACTACAACATTCTGGATGGAGGAGCCGCCGGAGCACAGGACCTCGCGGCCGCCGGATGCGCGCCGCTGAACGGGGCGGACAGCGCGTCAGCAGCGGCGGCGCAAGCAGTGGGCGTGACGACGACGCAGCCTTCTCCTTCCATGGCGCACGTCGACCCCGCGGCGGCGTGGGCGGCGGACTTCGGCTCCCAGACGCTCTTCCTCCCCGGCGGCGCGGCCGCTCTCCAGTACGCCGCCGCCGTCGAGGGGGAGTTCGTCAAGCAGTGCCGCACGGCGGCGGACGCCTGCTACCCGCCGGAGCCGGAGGACGGCGGCGGCGGCGCGAGGCAGTGCAACAACCAGGCAGCTGCCGATGTCGTGACGGCGGCGGTGCAACCGGAAGGCGCCGGCCTCCCGGTGTTCCTTGAACCCAAGTGCGCCGGCAGTTTCATGCCCGAGCCTGCTCTGGCTCCGGTGATGGACTTCATGGAAGCCATCCTGGGGTCGACGGCGGCGGCGTCGGCTGCCAGCGCTTCGTCTCTCGACGACACCTGCTTCTCGGCGAACGCCGGCATGCAGTCCCACTGTTGGATTCCCTGAATTATTCACCCTATTTACTTCCATCGGTAGATGCATATATACATGCATGGATGACTCTTCATCAAGCGCGCGCGGAGTATCAGATATGATTAAGTATAGAGTTTATGAAATAATTAATATAGATATAGTAGGTTTCTCTCACTCTCATCGATCAGGGTAGTAACAACATGGGTTACATGTAAATATGTTTACGTACGTATATATAA
MGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEALIVE
LHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAVGSLHPDLYYNILDGGAAGAQDLAAAGCAPLNGADSASAA
AAQAVGVTTTQPSPSMAHVDPAAAWAADFGSQTLFLPGGAAALQYAAAVEGEFVKQCRTAADACYPPEPEDGGGGARQCN
NQAAADVVTAAVQPEGAGLPVFLEPKCAGSFMPEPALAPVMDFMEAILGSTAAASAASASSLDDTCFSANAGMQSHCWIP
TCCGTCCAGCTCCCTTAGCCATGCA...
TCCGTCCAGCTCCCTTAGCCATGCATGAAGCCCTCGGCGGTCCAGCCACTCACATTTGAGGCAACCTAGAGCGTGTGCAGTAACATGCCTGCTCACACGCCTAGGCTCATAGCTAGCTAAGCTTAGGGTTCCAACTGCATGCACAGGTTTGGGCCGACTTTTCCTGCCCGTGCTTTTACCCTGCCTGCCCAGCCCTGGCCCTGGGTGCGTTTGCATTGCAGCCACTGCATGGATGCATTTGGCATGCCGCGGTACTGCTGCTCGCTCGCCCCTTCCGTGCGCGGTGCGCCACTGCTAGTGAGAAGAGATATAGCTAGGCTTCAGTGCGACGACGACGACGAGATGGGGCACCACTCCTGCTGCAACAAGCAGAAGGTCCGGAGGGGCTTGTGGTCGCCGGAGGAGGACGAGAAGCTCGTCAAGTACATCACCGCGCACGGCCATGGTTGCTGGAGCTCAGTCCCAAGGCAAGCAGGGCTGCAGCGGTGCGGCAAGAGCTGCAGGCTGAGGTGGATCAACTACCTGAGGCCGGACCTGAAGAGGGGAAGCTTCTCGCAGCAGGAGGAGGCCCTCATCGTCGAGCTCCACAGGGTGCTTGGGAACAGGTGGGCCCAGATCGCCAAGCATCTGCCTGGTAGAACGGACAACGAGGTGAAGAACTTCTGGAACTCCACCATCAAGAAGAAGCTCATCTCCCAGGCCGTGGGCAGCCTCCACCCAGACCTGTACTACAACATTCTGGATGGAGGAGCCGCCGGAGCACAGGACCTCGCGGCCGCCGGATGCGCGCCGCTGAACGGGGCGGACAGCGCGTCAGCAGCGGCGGCGCAAGCAGTGGGCGTGACGACGACGCAGCCTTCTCCTTCCATGGCGCACGTCGACCCCGCGGCGGCGTGGGCGGCGGACTTCGGCTCCCAGACGCTCTTCCTCCCCGGCGGCGCGGCCGCTCTCCAGTACGCCGCCGCCGTCGAGGGGGAGTTCGTCAAGCAGTGCCGCACGGCGGCGGACGCCTGCTACCCGCCGGAGCCGGAGGACGGCGGCGGCGGCGCGAGGCAGTGCAACAACCAGGCAGCTGCCGATGTCGTGACGGCGGCGGTGCAACCGGAAGGCGCCGGCCTCCCGGTGTTCCTTGAACCCAAGTGCGCCGGCAGTTTCATGCCCGAGCCTGCTCTGGCTCCGGTGATGGACTTCATGGAAGCCATCCTGGGGTCGACGGCGGCGGCGTCGGCTGCCAGCGCTTCGTCTCTCGACGACACCTGCTTCTCGGCGAACGCCGGCATGCAGTCCCACTGTTGGATTCCCTGAATTATTCACCCTATTTACTTCCATCGGTAGATGCATATATACATGCATGGATGACTCTTCATCAAGCGCGCGCGGAGTATCAGATATGATTAAGTATAGAGTTTATGAAATAATTAATATAGATATAGTAGGTTTCTCTCACTCTCATCGATCAGGGTAGTAACAACATGGGTTACATGTAAATATGTTTACGTACGTATATATAA
MHVYMHLPMEVNRVNNSGNPTVGLHAGVRREAGVVERRSAGSRRRRRRPQDGFHEVHHRSQSRLGHETAGALGFKEHREA
GAFRLHRRRHDIGSCLVVALPRAAAAVLRLRRVAGVRRRAALLDELPLDGGGVLESGRAAGEEERLGAEVRRPRRRGVDV
RHGRRRLRRRHAHCLRRRC
TTATATATACGTACGTAAACATATT...
TTATATATACGTACGTAAACATATTTACATGTAACCCATGTTGTTACTACCCTGATCGATGAGAGTGAGAGAAACCTACTATATCTATATTAATTATTTCATAAACTCTATACTTAATCATATCTGATACTCCGCGCGCGCTTGATGAAGAGTCATCCATGCATGTATATATGCATCTACCGATGGAAGTAAATAGGGTGAATAATTCAGGGAATCCAACAGTGGGACTGCATGCCGGCGTTCGCCGAGAAGCAGGTGTCGTCGAGAGACGAAGCGCTGGCAGCCGACGCCGCCGCCGTCGACCCCAGGATGGCTTCCATGAAGTCCATCACCGGAGCCAGAGCAGGCTCGGGCATGAAACTGCCGGCGCACTTGGGTTCAAGGAACACCGGGAGGCCGGCGCCTTCCGGTTGCACCGCCGCCGTCACGACATCGGCAGCTGCCTGGTTGTTGCACTGCCTCGCGCCGCCGCCGCCGTCCTCCGGCTCCGGCGGGTAGCAGGCGTCCGCCGCCGTGCGGCACTGCTTGACGAACTCCCCCTCGACGGCGGCGGCGTACTGGAGAGCGGCCGCGCCGCCGGGGAGGAAGAGCGTCTGGGAGCCGAAGTCCGCCGCCCACGCCGCCGCGGGGTCGACGTGCGCCATGGAAGGAGAAGGCTGCGTCGTCGTCACGCCCACTGCTTGCGCCGCCGCTGCTGACGCGCTGTCCGCCCCGTTCAGCGGCGCGCATCCGGCGGCCGCGAGGTCCTGTGCTCCGGCGGCTCCTCCATCCAGAATGTTGTAGTACAGGTCTGCAGCGAGCATTGCATTGCAGCAGAAGAAGCCGAGTTAGAGTTGTGTTTCCGTCGCATGCTCGATAAATTTGTGTCGTCGTCAGTCTGTGTTTCTTCAGGAGAGAAAAAAAAAACATCGGTGTCGTCGGTTTCTCTGATT
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